A man is in hospital with serious injuries after he was shot during a confrontation with York Regional Police in Newmarket early Tuesday.

The shooting happened just after midnight as police responded to reports of a gunshot on Calgain Road, near Davis Drive and Lorne Avenue.

A news release issued by the York Regional Police on Tuesday says the man was advancing on officers while holding a handgun when he was shot.

The man was taken to a local hospital before he was transferred to Sunnybrook Hospital.

The province's Special Investigations Unit — which probes all police shootings — is investigating.

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Parvin Khazen awoke to find a bullet hole in her living room window. (Linda Ward/CBC)

No police officers were injured in the incident.

Parvin Khazen, who lives near the site of the shooting, awoke to find a hole in her living room window and a bullet fragment lodged between its panes of glass.

She and her daughter just moved into the apartment last night.

"Believe me at the moment I am terrified," she told CBC News. "I don't know which environment I just moved in and I have a small kid.

And now Khazan’s daughter says she does not want to stay in that apartment.

“[Police] were confronted by a man with a handgun, this man advanced upon the officers and police discharged their firearms," a police spokesman said. 

The SIU said that they are speaking with six officers, three of which are directly involved.